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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38668132_38672805_R

Intron Information:

Intron Rank:

149427

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

38668132 - 38672805

Intron Length:

4674

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TAGCTCAAAGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTAAG

U12 Branch Point Sequence:

TTCTAAGTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

82.3

25.5

Major BPS

70.6

0.51

1.5

77.9

34.9

Major PPT

58.3

0.19

1.1

53.3

40.2

Minor 5ss

41.9

-0.9

2.8

53.7

43.8

Minor BPS

48.1

-0.1

2.4

69.45

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027895

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039107

38668081 - 38683726

15646