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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38672883_38673304_R

Intron Information:

Intron Rank:

149428

Intron Class:

major

Intron Phase:

Intron Coordinates:

38672883 - 38673304

Intron Length:

422

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTCAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAGAG

U12 Branch Point Sequence:

CTTTTCTCAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

64.9

41.1

Major BPS

55.2

0.13

1.6

60.7

45.9

Major PPT

81.3

0.7

0.8

77.6

29.8

Minor 5ss

26.8

-2.7

28.2

38.6

Minor BPS

71.2

0.66

1.5

79.1

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027895

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039107

38668081 - 38683726

15646