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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38674300_38680937_R

Intron Information:

Intron Rank:

149432

Intron Class:

major

Intron Phase:

Intron Coordinates:

38674300 - 38680937

Intron Length:

6638

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TGCTGCTGATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

88.8

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

96.2

1.04

0.5

92.4

17.6

Minor 5ss

37.5

-1.4

2.8

48.3

41.8

Minor BPS

46.3

-0.2

2.1

65.23

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027895

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042388

38673783 - 38683726

9944