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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38674300_38683663_R

Intron Information:

Intron Rank:

149426

Intron Class:

major

Intron Phase:

Intron Coordinates:

38674300 - 38683663

Intron Length:

9364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TGCTGCTGATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

1.2

80.7

33.6

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

96.2

1.04

0.5

92.4

17.6

Minor 5ss

32.7

-2

3.2

43.9

43.8

Minor BPS

46.3

-0.2

2.1

65.23

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027895

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039107

38668081 - 38683726

15646

ENSAPLT00000034723

38667187 - 38683726

16540