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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38738138_38747572_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

38738138 - 38747572

Intron Length:

9435

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTATTAATA

5'SS Class:

weak_major

3'SS Sequence:

GTCCTTCTTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTCCAT

U12 Branch Point Sequence:

ACTGGCTTGAGC

Flanking Amino Acid:

GKGNKKESGMTRGPKLNTIV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.8

0.14

1.1

38.7

Major BPS

52.4

0.06

1.3

41.7

Major PPT

78.1

0.63

0.8

73.1

31.8

Minor 5ss

44.5

-0.6

2.8

54.2

43.9

Minor BPS

45.6

-0.3

2.1

55.15

43.8

Associated Gene:

Gene:

TANC1

Ensembl Gene ID:

ENSAPLG00000002937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003000

38738071 - 38805169

67099