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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38816848_38819105_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38816848 - 38819105

Intron Length:

2258

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTGAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

TTTTTTTTGAAG

Flanking Amino Acid:

FSYDGQMLVSGSVDKCVIIY

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

72.7

44.5

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

87.5

0.84

0.9

90.6

22.1

Minor 5ss

40.7

-1

2.9

49.5

46.5

Minor BPS

64.4

0.31

1.5

70.73

36.5

Associated Gene:

Gene:

WDSUB1

Ensembl Gene ID:

ENSAPLG00000002463

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018293

38809722 - 38828545

18824

ENSAPLT00000002479

38773357 - 38828545

55189

ENSAPLT00000033705

38809027 - 38828545

19519

ENSAPLT00000029214

38773421 - 38828545

55125