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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38878695_38880882_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38878695 - 38880882

Intron Length:

2188

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTACCTGAA

5'SS Class:

major

3'SS Sequence:

AATTCTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

TAGGCATTAATT

Flanking Amino Acid:

PSTLTPSTHCGISKRRRVTD

Intron Amino Acid Position:

676

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.2

0.36

1.2

61.4

39.3

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

80.2

0.68

0.8

78.2

35.3

Minor 5ss

36.6

-1.5

3.4

45.8

44.7

Minor BPS

60.2

0.4

1.7

74.22

42.7

Associated Gene:

Gene:

BAZ2B

Ensembl Gene ID:

ENSAPLG00000015688

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041250

38849495 - 38902865

53371

ENSAPLT00000027136

38832436 - 38926074

93639

ENSAPLT00000023878

38828946 - 38902865

73920

ENSAPLT00000047825

38828946 - 38902865

73920

ENSAPLT00000016494

38828946 - 38902865

73920

ENSAPLT00000041419

38838649 - 38902863

64215