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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38878695_38882539_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38878695 - 38882539

Intron Length:

3845

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGTTTAA

5'SS Class:

major

3'SS Sequence:

AATTCTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

TAGGCATTAATT

Flanking Amino Acid:

EDDDSDDSQSGISKRRRVTD

Intron Amino Acid Position:

640

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

69.1

33.3

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

80.2

0.68

0.8

78.2

35.3

Minor 5ss

32.7

-2

3.1

46.1

Minor BPS

60.2

0.4

1.7

74.22

42.7

Associated Gene:

Gene:

BAZ2B

Ensembl Gene ID:

ENSAPLG00000015688

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022536

38832436 - 38902863

70428