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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38902866_38926035_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

38902866 - 38926035

Intron Length:

23170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

TTGTCTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCAGAA

U12 Branch Point Sequence:

TTGTCTTTTACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

75.9

39.9

Major BPS

49.9

-0

1.1

46.7

38.9

Major PPT

88.6

0.87

0.7

83.7

31.3

Minor 5ss

41.5

-0.9

2.8

57.1

41.1

Minor BPS

70.7

0.64

1.6

78.96

37.6

Associated Gene:

Gene:

BAZ2B

Ensembl Gene ID:

ENSAPLG00000015688

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027136

38832436 - 38926074

93639