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Intron Name: Anas_platyrhynchos_platyrhynchos_7_38982782_38987232_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

38982782 - 38987232

Intron Length:

4451

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCTGCTTG

5'SS Class:

weak_major

3'SS Sequence:

TGTCCTTCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TGCATTTGAAAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.9

0.4

1.3

62.3

44.7

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

82.5

0.73

0.8

76.4

32.3

Minor 5ss

-0.1

2.5

64.6

46.9

Minor BPS

48.4

-0

1.5

63.17

40.8

Associated Gene:

Gene:

MARCHF7

Ensembl Gene ID:

ENSAPLG00000015604

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020156

38982577 - 39008148

25572