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Intron Name: Anas_platyrhynchos_platyrhynchos_7_3902198_3909013_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3902198 - 3909013

Intron Length:

6816

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGTGG

5'SS Class:

major

3'SS Sequence:

TTCATATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

GTTTTCATATTT

Flanking Amino Acid:

ANGFQIKMIEGASPIESHME

Intron Amino Acid Position:

818

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

43.8

Major BPS

100

1.24

0.5

100

Major PPT

83.8

0.76

0.8

81.2

35.3

Minor 5ss

42.2

-0.9

3.1

55.4

48.8

Minor BPS

55.1

0.24

1.9

77.23

39.4

Associated Gene:

Gene:

PMS1

Ensembl Gene ID:

ENSAPLG00000011887

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044338

3899828 - 3940418

40591

ENSAPLT00000012420

3899439 - 3940418

40980