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Intron Name: Anas_platyrhynchos_platyrhynchos_7_3919392_3922977_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3919392 - 3922977

Intron Length:

3586

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTAAAGACTT

Flanking Amino Acid:

PFQHCCEDPEINLSGFLPKA

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.04

0.7

89.2

17.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

89.9

0.9

0.7

84.9

29.9

Minor 5ss

38.3

-1.3

2.9

47.2

Minor BPS

41.5

-0.5

2.2

68.35

42.1

Associated Gene:

Gene:

PMS1

Ensembl Gene ID:

ENSAPLG00000011887

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044338

3899828 - 3940418

40591

ENSAPLT00000012420

3899439 - 3940418

40980