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Intron Name: Anas_platyrhynchos_platyrhynchos_7_3947069_3948575_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3947069 - 3948575

Intron Length:

1507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTTCT

5'SS Class:

major

3'SS Sequence:

TTTTCTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTCAT

U12 Branch Point Sequence:

GTGTCATCAGCT

Flanking Amino Acid:

RKFFTISPIILYFLASFYTK

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

70.8

35.4

Major BPS

67.1

0.42

1.4

71.4

45.1

Major PPT

90.2

0.9

0.6

85.5

21.7

Minor 5ss

40.3

-1.1

60.6

43.7

Minor BPS

48.6

-0

70.76

45.4

Associated Gene:

Gene:

ORMDL1

Ensembl Gene ID:

ENSAPLG00000016520

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023737

3942472 - 3949056

6585