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Intron Name: Anas_platyrhynchos_platyrhynchos_7_3952708_3952786_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
3952708 - 3952786

Intron Length:
79

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATTTTTA

5'SS Class:
major

3'SS Sequence:
TACATTTCTATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTGAT

U12 Branch Point Sequence:
ACCCCTTTGATC

Flanking Amino Acid:
NTIIQKEKEEGIQEGELLSC

Intron Amino Acid Position:
263

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.8
0.7
1
78.6
31

Major BPS
84
0.85
0.9
75
39.9

Major PPT
74.8
0.56
0.9
69.2
36.6

Minor 5ss
49.9
-0
2.4
67.2
43.9

Minor BPS
55.1
0.14
1.2
56.51
36.7

Associated Gene:

Gene:
OSGEPL1

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

3949813 - 3954049
4237

3946213 - 3954049
7837

3945970 - 3954049
8080