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Intron Name: Anas_platyrhynchos_platyrhynchos_7_39722_39853_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39722 - 39853

Intron Length:

132

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTCTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

CTAGTCTTAATA

Flanking Amino Acid:

TQRSSSEKNLKGTHKCGQPG

Intron Amino Acid Position:

462

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

77.9

29.9

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

78.7

0.65

0.9

36.8

Minor 5ss

35.5

-1.6

44.2

37.3

Minor BPS

64.2

0.44

1.4

67.11

40.1

Associated Gene:

Gene:

TRAK2

Ensembl Gene ID:

ENSAPLG00000014773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029327

30164 - 43887

13724

ENSAPLT00000015441

26351 - 43887

17537

ENSAPLT00000042096

26351 - 43961

17611