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Intron Name: Anas_platyrhynchos_platyrhynchos_7_3987660_3991787_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3987660 - 3991787

Intron Length:

4128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

GTTACTCTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TTACTCTTAAAG

Flanking Amino Acid:

LYLGHALSTWGDRMWHFAVS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

71.9

33.8

Major BPS

71.2

0.53

70.3

31.9

Major PPT

68.5

0.42

1.1

67.5

38.1

Minor 5ss

27.1

-2.6

26.1

Minor BPS

64.5

0.32

1.5

67.06

Associated Gene:

Gene:

SLC40A1

Ensembl Gene ID:

ENSAPLG00000011355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011846

3987451 - 4001415

13965