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Intron Name: Anas_platyrhynchos_platyrhynchos_7_3991948_3992757_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
3991948 - 3992757

Intron Length:
810

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTAGATGT

5'SS Class:
major

3'SS Sequence:
TGATTTACAACAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTGAT

U12 Branch Point Sequence:
TCTCTTTTGATT

Flanking Amino Acid:
DWVDKNSRLKVAQTSLVVQN

Intron Amino Acid Position:
92

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.2
0.69
1.1
73.6
37.9

Major BPS
96.4
1.15
0.6
85.7
34.9

Major PPT
68.6
0.42
1
63.7
41.5

Minor 5ss
36
-1.6
3
48.8
46.8

Minor BPS
63.4
0.5
1.2
75.19
36.2

Associated Gene:

Gene:
SLC40A1

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

3987451 - 4001415
13965