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Intron Name: Anas_platyrhynchos_platyrhynchos_7_3996731_3998466_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3996731 - 3998466

Intron Length:

1736

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCGGAA

5'SS Class:

major

3'SS Sequence:

TTTCTGTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTAAC

U12 Branch Point Sequence:

GTGTATCTAACA

Flanking Amino Acid:

SELKQLNAKKDNDMKPAEGV

Intron Amino Acid Position:

254

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.2

61.9

38.6

Major BPS

75.8

0.64

0.9

75.6

25.3

Major PPT

88.9

0.88

0.7

83.5

31.6

Minor 5ss

40.2

-1.1

3.5

54.8

49.4

Minor BPS

51.9

0.06

1.9

65.9

40.2

Associated Gene:

Gene:

SLC40A1

Ensembl Gene ID:

ENSAPLG00000011355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011846

3987451 - 4001415

13965