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Intron Name: Anas_platyrhynchos_platyrhynchos_7_3999133_4000135_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3999133 - 4000135

Intron Length:

1003

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATGGAT

U12 Branch Point Sequence:

GTATGGATAACT

Flanking Amino Acid:

LFAGVIAARVGLWSFDLTVT

Intron Amino Acid Position:

476

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.8

83.1

28.6

Major BPS

63.6

0.34

1.4

63.4

44.3

Major PPT

86.2

0.81

0.6

22.5

Minor 5ss

-1.7

2.8

42.6

38.5

Minor BPS

45.2

-0.2

2.6

70.68

45.6

Associated Gene:

Gene:

SLC40A1

Ensembl Gene ID:

ENSAPLG00000011355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011846

3987451 - 4001415

13965