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Intron Name: Anas_platyrhynchos_platyrhynchos_7_40153_40497_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

40153 - 40497

Intron Length:

345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCACACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

TCTTTTGTCACA

Flanking Amino Acid:

EKLQIVKPIEGSQTLFHWQQ

Intron Amino Acid Position:

562

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.2

35.1

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

0.5

64.7

41.3

Minor 5ss

29.8

-2.3

3.3

38.8

46.3

Minor BPS

47.2

-0.2

2.3

65.59

41.9

Associated Gene:

Gene:

TRAK2

Ensembl Gene ID:

ENSAPLG00000014773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042096

26351 - 43961

17611

ENSAPLT00000029327

30164 - 43887

13724

ENSAPLT00000015441

26351 - 43887

17537