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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4033369_4033868_R


Intron Information:

Intron Rank:
17

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
4033369 - 4033868

Intron Length:
500

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAA|GTAAGAAAT

5'SS Class:
strong_major

3'SS Sequence:
TTCTTTATTTTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TCTTTAT

U12 Branch Point Sequence:
CTTTCTTTATTT

Flanking Amino Acid:
SQLYFLTDAQELMTFSTKSP

Intron Amino Acid Position:
729

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.7
0.79
0.9
83.5
27.6

Major BPS
83.9
0.84
1
73.9
41.3

Major PPT
86
0.81
0.7
85.7
27.3

Minor 5ss
36.9
-1.5
3.1
49.9
40.5

Minor BPS
69.3
0.68
1.6
83.14
39

Associated Gene:

Gene:
WDR75

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4030989 - 4045778
14790

4031948 - 4045778
13831