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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4038498_4039083_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
4038498 - 4039083

Intron Length:
586

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAATGGTA

5'SS Class:
strong_major

3'SS Sequence:
TCTTTCCTTCTAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
AAATGAA

U12 Branch Point Sequence:
AATGAAATAAGT

Flanking Amino Acid:
KLWFFDEETQSFKLNTQISM

Intron Amino Acid Position:
492

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.9
0.73
1
75
34.9

Major BPS
58.9
0.22
1
49.8
35.1

Major PPT
84.8
0.78
0.7
77.7
31.1

Minor 5ss
32.9
-2
3.6
46.7
48.6

Minor BPS
40.3
-0.6
2.2
59.06
43.3

Associated Gene:

Gene:
WDR75

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4030989 - 4045778
14790

4031948 - 4045778
13831