Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_4039824_4039908_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4039824 - 4039908

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGTTCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

CCGATCTGAAGT

Flanking Amino Acid:

FSKSIQGLIRARDVKTGLVV

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.6

1.07

0.7

84.1

26.6

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

83.6

0.76

0.8

76.2

37.8

Minor 5ss

-1.9

3.1

41.6

Minor BPS

-0.2

1.8

56.41

46.1

Associated Gene:

Gene:

WDR75

Ensembl Gene ID:

ENSAPLG00000011060

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011531

4030989 - 4045778

14790

ENSAPLT00000011521

4031948 - 4045778

13831