Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_4039969_4040301_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4039969 - 4040301

Intron Length:

333

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGCCAA

5'SS Class:

major

3'SS Sequence:

CTTTTCCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

AAGTCTTTATAT

Flanking Amino Acid:

TLYCTLHTDNRITIINSNLR

Intron Amino Acid Position:

376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.9

0.45

1.1

59.1

41.7

Major BPS

79.2

0.73

75.3

39.4

Major PPT

90.8

0.92

0.6

88.8

20.5

Minor 5ss

39.4

-1.2

3.1

53.1

44.8

Minor BPS

54.6

0.22

1.7

68.77

Associated Gene:

Gene:

WDR75

Ensembl Gene ID:

ENSAPLG00000011060

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011531

4030989 - 4045778

14790

ENSAPLT00000011521

4031948 - 4045778

13831