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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4041284_4041862_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
4041284 - 4041862

Intron Length:
579

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTATGTTCA

5'SS Class:
strong_major

3'SS Sequence:
TCCTTCTCCATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AGTTGAT

U12 Branch Point Sequence:
TGTGCTTGAAGT

Flanking Amino Acid:
TGHADGKIRLWRNFYHNKEY

Intron Amino Acid Position:
293

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.4
0.72
0.9
72.1
33.4

Major BPS
72.4
0.56
1.1
63.1
44.4

Major PPT
76.6
0.6
0.7
72.3
26.1

Minor 5ss
46.7
-0.3
2.4
56
43.5

Minor BPS
53.1
0.18
1.9
73.22
43.7

Associated Gene:

Gene:
WDR75

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4030989 - 4045778
14790

4031948 - 4045778
13831