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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4043542_4044221_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
4043542 - 4044221

Intron Length:
680

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTATGCTTA

5'SS Class:
strong_major

3'SS Sequence:
TTTCTTTGGTTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTGCAA

U12 Branch Point Sequence:
TTTTTGGTAACA

Flanking Amino Acid:
FVILPKRGERDTFQLVSVKL

Intron Amino Acid Position:
189

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.4
0.79
0.9
76.7
34.9

Major BPS
65.8
0.39
1.4
77.7
37.1

Major PPT
74.3
0.55
1
77.1
37.1

Minor 5ss
62.3
0.42
2.3
73
44

Minor BPS
52.6
0.08
2.6
78.35
38.8

Associated Gene:

Gene:
WDR75

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4030989 - 4045778
14790

4031948 - 4045778
13831