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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4045023_4045293_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
4045023 - 4045293

Intron Length:
271

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGGGGCAG

5'SS Class:
major

3'SS Sequence:
TTTCGCTCCTCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTGAT

U12 Branch Point Sequence:
TCTGTTGTAATA

Flanking Amino Acid:
VRLNPHNRLQLYSCSLDGSI

Intron Amino Acid Position:
136

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.1
0.55
1.1
56.5
44.1

Major BPS
96.4
1.15
0.6
85.7
34.9

Major PPT
79.8
0.67
0.8
77.3
31.4

Minor 5ss
23.3
-3.1
3.2
28.1
44.1

Minor BPS
48.2
-0.1
2
61.33
40.4

Associated Gene:

Gene:
WDR75

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4030989 - 4045778
14790

4031948 - 4045778
13831