Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_4068991_4074468_F

Intron Information:

Intron Rank:

130395

Intron Class:

major

Intron Phase:

Intron Coordinates:

4068991 - 4074468

Intron Length:

5478

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTTCA

5'SS Class:

major

3'SS Sequence:

TTTTAATCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

70.6

36.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.58

71.1

38.4

Minor 5ss

42.5

-0.8

2.7

51.5

44.9

Minor BPS

81.7

0.97

0.9

85.33

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020147

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037417

4066973 - 4074973

8001