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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4156322_4157953_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4156322 - 4157953

Intron Length:

1632

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGATTG

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTTTAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATCC

Flanking Amino Acid:

HTTRDFDNGIGRGRKGQKGE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

74.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

75.1

0.57

0.8

72.5

30.8

Minor 5ss

41.7

-0.9

3.1

53.3

44.8

Minor BPS

71.4

0.65

1.5

81.41

33.2

Associated Gene:

Gene:

COL5A2

Ensembl Gene ID:

ENSAPLG00000007858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008658

4107852 - 4211173

103322