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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4176045_4177317_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4176045 - 4177317

Intron Length:

1273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTGAGTGTC

5'SS Class:

major

3'SS Sequence:

TTCTCTCTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTATTTTAATT

Flanking Amino Acid:

TGAMGATGPLGPRGMPGERG

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

71.2

32.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.7

0.6

75.4

33.4

Minor 5ss

33.7

-1.9

3.3

45.1

38.2

Minor BPS

76.1

0.9

1.1

87.86

31.1

Associated Gene:

Gene:

COL5A2

Ensembl Gene ID:

ENSAPLG00000007858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008658

4107852 - 4211173

103322