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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4177372_4178204_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4177372 - 4178204

Intron Length:

833

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTAGG

5'SS Class:

major

3'SS Sequence:

TTTTCATATCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

GTTTTCATATCT

Flanking Amino Acid:

RGRIGPQGAPGGRGQHGMPG

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.1

45.2

Major BPS

100

1.24

0.5

100

Major PPT

0.63

0.9

71.3

38.9

Minor 5ss

-1.3

2.8

52.4

44.2

Minor BPS

59.2

0.37

1.9

81.49

39.8

Associated Gene:

Gene:

COL5A2

Ensembl Gene ID:

ENSAPLG00000007858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008658

4107852 - 4211173

103322