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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4181256_4183014_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4181256 - 4183014

Intron Length:

1759

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTGATGTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TATTCTGTGATG

Flanking Amino Acid:

PGFPGAPGVKGEAGPTGPRG

Intron Amino Acid Position:

341

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.9

1.13

0.6

92.3

16.1

Major BPS

71.2

0.53

70.3

31.9

Major PPT

65.2

0.34

44.1

Minor 5ss

-1.7

2.7

41.8

44.8

Minor BPS

50.9

-0.1

2.1

62.59

40.2

Associated Gene:

Gene:

COL5A2

Ensembl Gene ID:

ENSAPLG00000007858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008658

4107852 - 4211173

103322