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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4183114_4183568_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4183114 - 4183568

Intron Length:

455

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

GTGTTATTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTAATTTTAATG

Flanking Amino Acid:

QGPAGSQGLPGTEGTDGSPG

Intron Amino Acid Position:

374

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

81.2

32.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.7

0.6

0.9

74.4

40.4

Minor 5ss

41.5

-0.9

2.8

41.2

Minor BPS

63.4

0.28

1.3

64.2

38.2

Associated Gene:

Gene:

COL5A2

Ensembl Gene ID:

ENSAPLG00000007858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008658

4107852 - 4211173

103322