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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4183818_4184275_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4183818 - 4184275

Intron Length:

458

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAATGATG

5'SS Class:

major

3'SS Sequence:

TTGTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGGGAT

U12 Branch Point Sequence:

TTTTTTTTTGTT

Flanking Amino Acid:

TGPPGIRGQPGDPGVPGFKG

Intron Amino Acid Position:

422

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

66.6

44.3

Major BPS

-0

1.5

48.8

46.3

Major PPT

92.9

0.97

0.7

92.3

26.6

Minor 5ss

36.4

-1.5

3.3

49.6

46.4

Minor BPS

-0.3

3.5

78.64

38.7

Associated Gene:

Gene:

COL5A2

Ensembl Gene ID:

ENSAPLG00000007858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008658

4107852 - 4211173

103322