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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4184330_4185478_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4184330 - 4185478

Intron Length:

1149

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

TTACTTTTAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTACTTTTAATA

Flanking Amino Acid:

KGEAGPKGEPGPQGPQGPIG

Intron Amino Acid Position:

440

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

81.2

32.7

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

76.2

0.59

0.9

73.7

35.4

Minor 5ss

41.5

-0.9

2.8

41.2

Minor BPS

68.9

0.59

1.1

32.5

Associated Gene:

Gene:

COL5A2

Ensembl Gene ID:

ENSAPLG00000007858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008658

4107852 - 4211173

103322