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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4186295_4187022_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4186295 - 4187022

Intron Length:

728

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGAA

5'SS Class:

strong_major

3'SS Sequence:

GGTATCTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAACAA

U12 Branch Point Sequence:

CTCCTGTTAACA

Flanking Amino Acid:

PGSDGLPGPKGAQGERGPAG

Intron Amino Acid Position:

494

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

27.6

Major BPS

61.8

0.29

1.1

69.7

35.6

Major PPT

72.6

0.51

0.9

66.1

40.7

Minor 5ss

31.4

-2.1

3.2

39.9

46.1

Minor BPS

0.03

2.1

63.68

43.1

Associated Gene:

Gene:

COL5A2

Ensembl Gene ID:

ENSAPLG00000007858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008658

4107852 - 4211173

103322