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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4189118_4189611_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4189118 - 4189611

Intron Length:

494

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTCAA

5'SS Class:

major

3'SS Sequence:

TCCTTTTGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTCCTCTAACA

Flanking Amino Acid:

VGPSGPVGPPGLAGERGEQG

Intron Amino Acid Position:

614

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

68.2

38.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.8

0.65

0.8

76.2

32.4

Minor 5ss

35.7

-1.6

2.9

46.8

42.6

Minor BPS

64.4

0.45

1.6

76.28

34.1

Associated Gene:

Gene:

COL5A2

Ensembl Gene ID:

ENSAPLG00000007858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008658

4107852 - 4211173

103322