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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4189666_4190255_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4189666 - 4190255

Intron Length:

590

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TACATTTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

QGPPGPTGFQGLPGPPGPPG

Intron Amino Acid Position:

632

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

76.8

31.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

73.8

0.54

69.3

40.2

Minor 5ss

39.1

-1.2

50.2

46.2

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

COL5A2

Ensembl Gene ID:

ENSAPLG00000007858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008658

4107852 - 4211173

103322