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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4191998_4192113_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4191998 - 4192113

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTCCC

5'SS Class:

major

3'SS Sequence:

GTATTTTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATAAC

U12 Branch Point Sequence:

AGTGTCATAACT

Flanking Amino Acid:

AGTPGPKGDRGGIGEKGAEG

Intron Amino Acid Position:

734

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.1

63.5

41.4

Major BPS

65.3

0.38

1.1

66.2

36.5

Major PPT

78.2

0.64

0.9

73.4

36.8

Minor 5ss

36.8

-1.5

2.9

42.7

37.7

Minor BPS

58.5

0.35

1.7

75.83

40.5

Associated Gene:

Gene:

COL5A2

Ensembl Gene ID:

ENSAPLG00000007858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008658

4107852 - 4211173

103322