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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4192168_4193012_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4192168 - 4193012

Intron Length:

845

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

ATTTGTTCAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

ATTTTTCTAACT

Flanking Amino Acid:

EGTAGNDGARGLPGPIGPMG

Intron Amino Acid Position:

752

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

33.6

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

63.8

0.31

1.1

65.2

39.8

Minor 5ss

36.3

-1.6

2.7

38.8

40.3

Minor BPS

68.8

0.67

1.6

86.58

32.7

Associated Gene:

Gene:

COL5A2

Ensembl Gene ID:

ENSAPLG00000007858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008658

4107852 - 4211173

103322