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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4193067_4193182_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4193067 - 4193182

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACAGA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTATTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

CTAACCTTAAAT

Flanking Amino Acid:

MGPAGPTGEKGEPGPRGLVG

Intron Amino Acid Position:

770

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

71.3

40.5

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

76.8

0.6

1.1

80.6

35.6

Minor 5ss

38.1

-1.3

49.1

46.7

Minor BPS

69.1

0.68

1.5

79.3

42.1

Associated Gene:

Gene:

COL5A2

Ensembl Gene ID:

ENSAPLG00000007858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008658

4107852 - 4211173

103322