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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4193237_4194316_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4193237 - 4194316

Intron Length:

1080

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTAAA

5'SS Class:

major

3'SS Sequence:

ATTTTTCGACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTATTCTTAATT

Flanking Amino Acid:

VGPPGSRGNPGSRGENGPTG

Intron Amino Acid Position:

788

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

72.6

33.5

Major BPS

0.92

0.9

86.2

29.1

Major PPT

73.2

0.52

67.5

43.1

Minor 5ss

32.5

-2

2.8

43.1

43.9

Minor BPS

84.3

1.16

0.9

92.41

29.7

Associated Gene:

Gene:

COL5A2

Ensembl Gene ID:

ENSAPLG00000007858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008658

4107852 - 4211173

103322