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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4194371_4195185_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4194371 - 4195185

Intron Length:

815

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTATGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CGATCTCCTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CCTCTTTTAAAT

Flanking Amino Acid:

TGAVGFAGPPGPDGQPGVKG

Intron Amino Acid Position:

806

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

78.3

36.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

68.7

0.42

0.9

61.9

34.7

Minor 5ss

45.2

-0.5

3.2

44.2

Minor BPS

58.7

0.35

1.4

69.62

41.7

Associated Gene:

Gene:

COL5A2

Ensembl Gene ID:

ENSAPLG00000007858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008658

4107852 - 4211173

103322