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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4195455_4195654_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4195455 - 4195654

Intron Length:

200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTAGA

5'SS Class:

major

3'SS Sequence:

AAATATTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

ATTTCTTTCAGT

Flanking Amino Acid:

KGGRGTQGPPGATGFPGSAG

Intron Amino Acid Position:

860

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.1

71.3

40.3

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

70.4

0.46

43.6

Minor 5ss

-1.4

2.8

52.3

44.3

Minor BPS

60.1

0.4

81.74

40.3

Associated Gene:

Gene:

COL5A2

Ensembl Gene ID:

ENSAPLG00000007858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008658

4107852 - 4211173

103322