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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4198797_4198908_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4198797 - 4198908

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTGAT

5'SS Class:

major

3'SS Sequence:

GCAATCTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAT

U12 Branch Point Sequence:

ATTGCTTCATGT

Flanking Amino Acid:

PGDAGQRGETGSRGPMGPPG

Intron Amino Acid Position:

1058

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

74.7

35.4

Major BPS

69.6

0.49

1.3

73.6

41.8

Major PPT

68.5

0.42

0.9

61.9

39.5

Minor 5ss

37.3

-1.4

3.4

45.5

Minor BPS

45.2

-0.2

2.1

65.98

Associated Gene:

Gene:

COL5A2

Ensembl Gene ID:

ENSAPLG00000007858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008658

4107852 - 4211173

103322