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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4207014_4210148_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4207014 - 4210148

Intron Length:

3135

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGAGGA

5'SS Class:

major

3'SS Sequence:

TCATAACTGCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CTTTTCATAACT

Flanking Amino Acid:

FGIEIGPVCFVPAECCPR*

Intron Amino Acid Position:

1448

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.2

0.43

1.1

40.3

Major BPS

100

1.24

0.5

100

Major PPT

63.3

0.3

1.1

55.2

44.4

Minor 5ss

31.8

-2.1

3.4

39.1

46.1

Minor BPS

72.5

0.78

1.6

88.42

36.6

Associated Gene:

Gene:

COL5A2

Ensembl Gene ID:

ENSAPLG00000007858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008658

4107852 - 4211173

103322