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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4219784_4219971_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4219784 - 4219971

Intron Length:

188

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTGCTCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAA

U12 Branch Point Sequence:

TTTTGCTTACGT

Flanking Amino Acid:

FGESMNGGFQFSYGDPDLPE

Intron Amino Acid Position:

1316

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

85.9

23.9

Major BPS

65.6

0.39

0.9

55.4

32.7

Major PPT

79.9

0.67

0.9

73.8

36.9

Minor 5ss

29.7

-2.3

39.4

46.1

Minor BPS

56.1

0.27

2.3

83.33

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027431

4218405 - 4267822

49418

ENSAPLT00000018606

4218405 - 4267165

48761

ENSAPLT00000002527

4218405 - 4267165

48761