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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4227287_4227462_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4227287 - 4227462

Intron Length:

176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

TCTTTCCATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTCAAATTATCT

Flanking Amino Acid:

AGPQGGPGAPGPPGPQGTKG

Intron Amino Acid Position:

835

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

75.9

39.9

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

78.4

0.64

0.8

74.5

29.6

Minor 5ss

41.5

-0.9

2.8

57.1

41.1

Minor BPS

47.8

-0

2.1

71.14

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027431

4218405 - 4267822

49418

ENSAPLT00000018606

4218405 - 4267165

48761

ENSAPLT00000002527

4218405 - 4267165

48761