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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4228705_4228804_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4228705 - 4228804

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGCAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTCCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

TGTTCCTTACAG

Flanking Amino Acid:

PGPAGPPGDKGETGPAGAPG

Intron Amino Acid Position:

763

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

39.3

Major BPS

80.4

0.76

80.3

31.8

Major PPT

86.4

0.82

0.8

80.7

31.5

Minor 5ss

31.8

-2.1

3.5

46.7

48.6

Minor BPS

0.27

1.8

69.63

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027431

4218405 - 4267822

49418

ENSAPLT00000018606

4218405 - 4267165

48761

ENSAPLT00000002527

4218405 - 4267165

48761