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Intron Name: Anas_platyrhynchos_platyrhynchos_7_4228859_4229824_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4228859 - 4229824

Intron Length:

966

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TCTAATTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TATTTTCTAATT

Flanking Amino Acid:

DGLPGARGERGNVGPIGPPG

Intron Amino Acid Position:

745

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

72.2

39.5

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

71.2

0.48

69.5

41.2

Minor 5ss

28.5

-2.5

3.1

31.8

42.6

Minor BPS

64.2

0.52

1.6

81.19

34.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027431

4218405 - 4267822

49418

ENSAPLT00000018606

4218405 - 4267165

48761

ENSAPLT00000002527

4218405 - 4267165

48761